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Third party tools

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Linking in to your mine

This page aims to describe the various ways to link to a Mine.

Query builder

Links directly to query builder, starts a query using the provided list.

http://beta.flymine.org/beta/loadQuery.do?name=copy&method=list

Report page

Links directly to report page. URL available on report page in webapp.

http://human.intermine.org/human/portal.do?externalids=pparg&class=Gene&origin=readthedocs

Optionally, add extraVlue parameter with the organism name, e.g.:

http://human.intermine.org/human/portal.do?externalids=pparg&class=Gene&extraValue=H.+sapiens

Convert any identifiers to Genes

When linking to a report page or a list analysis page you can convert the data type, for instance if you provide a Protein identifier and want to link to the corresponding Gene, you need to specify the class as Gene. Will only work if you have a converter template available

http://www.flymine.org/query/portal.do?externalid=EVE_DROME&class=Gene

More examples

See FlyMine for more examples: https://intermineorg.wordpress.com/flymine/link-to-flymine/