Data Sets
================================

Load an XML file with details of your data sets and associated information, e.g. description and URL

Types of data loaded
--------------------

Update data source and data set entries

How to download the data 
---------------------------

Create your own datasets.xml file with your data in InterMine items XML format and put in your mine's `dbmodel/resources` directory so that it's on your classpath. 

.. code-block:: xml

    <?xml version="1.0"?>
    <items>
    <item id="09" class="" implements="DataSource">
        <attribute name="name" value="NCBI"/>
        <attribute name="description" value="National Centre for Biotechnology Information"/>
        <attribute name="url" value="https://www.ncbi.nlm.nih.gov"/>
    </item>
    <item id="10" class="" implements="DataSet">
        <attribute name="name" value="Homo sapiens genome sequence"/>
        <attribute name="description" value="Release GRCh38 of the Homo sapiens genome sequence"/>
        <attribute name="version" value="GRCh38.p12"/>
        <attribute name="url" value="https://www.ncbi.nlm.nih.gov"/>
        <reference name="dataSource" ref_id="09"/>
    </item>
    </items>

How to load the data into your mine
--------------------------------------

project XML example

.. code-block:: xml

    <source name="flymine-static" type="flymine-static">
      <property name="src.data.file" location="/data/datasets.xml"/>
    </source>

.. index:: data sources, data sets, provenance