This page aims to describe the various ways to link to a Mine.
Links to results of specified template. URL generated on template form in webapp.
Make sure to include &method=results at the end of the query string.
Links to results of query. Can run any query built by QueryBuilder; QueryBuilder generates the XML.
Links to list analysis page comprised of results of template query. “path” attribute determines which column used to create list. URL available on template form in webapp.
Links to list analysis page for specified objects. For a very long list, use a form instead of a link. Can use any identifiers.
Links directly to query builder, starts a query using the provided list.
http://beta.flymine.org/beta/loadQuery.do?name=copy&method=list
Links directly to report page. URL available on report page in webapp.
http://www.humanmine.org/humanmine/portal.do?externalids=pparg&class=Gene&origin=readthedocs
Optionally, add extraVlue parameter with the organism name, e.g.:
http://www.humanmine.org/humanmine/portal.do?externalids=pparg&class=Gene&extraValue=H.+sapiens
The example URL contains ‘’D. melanogaster’’ genes. The results will contain the corresponding ‘’C. elegans’’ genes, if any. This will only work if you have orthologue data loaded into your Mine. Will forward to report page OR list analysis page.
When linking to a report page or a list analysis page you can convert the data type, for instance if you provide a Protein identifier and want to link to the corresponding Gene, you need to specify the class as Gene. Will only work if you have a converter template available
http://www.flymine.org/query/portal.do?externalid=EVE_DROME&class=Gene
See FlyMine for more examples: https://intermineorg.wordpress.com/flymine/link-to-flymine/