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Updating to the Latest Release

See Upgrade Instructions for instructions on how to update your Mine.

See https://github.com/intermine/intermine/releases for details on the latest releases.


InterMine 1.2.1

This is a minor release consisting of bug fixes, see GitHub for the full list.

InterMine 1.2

This is a minor release consisting of bug fixes and some new features. See GitHub for the full list.

InterMine 1.1

In this release, we’ve added lots of new features - users can share lists, mines can have more than one “superuser” and users can change the background distribution of enrichment widgets. We’ve also improved the model for interactions and gene ontology.

Note

This release is only available via GitHub.

See Upgrade Instructions for instructions on how to update your Mine to the new version.

Report Widgets

You can now embed widgets in any HTML page. See http://report-widgets.labs.intermine.org/ for live, interactive examples.

See Report Widgets for details on how to use these for your mine.

List Widgets

Users can now change and save the background distribution for enrichment widgets on list analysis page.

Multiple Admins

The main superuser can “deputise” other users to give them superuser powers - meaning they can publish public templates and lists in the mine.

Sharing Lists

Users can share lists with registered users or invite new users to share lists.

Data

We’ve added a several new data sources

  • Uberon

  • identifiers

    • flybase-identifiers
    • zfin-identifiers
    • wormbase-identifiers
    • sgd-identifiers
  • Homologues

    • OrthoDB
    • Panther
    • Homologene

Export

When exporting sequences you can now specify the size of flanking regions to include.

Model Changes

  • GO
  • interactions

Please see Upgrade Instructions for the complete list of changes to the model.

Other

  • UPDATE - list upgrade performance significantly improved.
  • FIX - if a friendly mine is unavailable, this no longer causes a delay in pages being loaded
  • FIX - inner joins now work in all queries
  • FIX - lots of minor bug fixes, see the complete list https://github.com/intermine/intermine/issues?milestone=2
  • NEW - InterMine works with Tomcat 7.0